Dynamics of SARS-CoV-2 lineages in children and adults in 2021 and 2022

We aimed to describe SARS-CoV-2 lineages and diversity in children and adults in Estonia and similarity to travel-related cases and neighbouring countries. SARS-CoV-2 sequences in 2021-2022 from a nationwide study were included. The proportion of predominant lineages in Estonian regions and among tr...

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Veröffentlicht in:	PloS one 2024-12, Vol.19 (12), p.e0316213
Hauptverfasser:	Soeorg, Hiie, Abroi, Aare, Päll, Taavi, Dotsenko, Liidia, Jaaniso, Erik, Kaarna, Katrin, Lahesaare, Andrio, Naaber, Paul, Niglas, Heiki, Oopkaup, Ott Eric, Peterson, Hedi, Reisberg, Tuuli, Sadikova, Olga, Smit, Steven, Talas, Ulvi Gerst, Avi, Radko, Lutsar, Irja, Huik, Kristi
Format:	Artikel
Sprache:	eng
Schlagworte:	Adolescent Adult Adults Age groups Child Child, Preschool Children Clustering COVID-19 COVID-19 - epidemiology COVID-19 - virology Estonia - epidemiology Female Genetic diversity Humans Infections Male Middle Aged Pandemics Phylogeny Regression analysis SARS-CoV-2 - genetics SARS-CoV-2 - isolation & purification Severe acute respiratory syndrome coronavirus 2 Similarity Travel Viruses Young Adult
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Zusammenfassung:	We aimed to describe SARS-CoV-2 lineages and diversity in children and adults in Estonia and similarity to travel-related cases and neighbouring countries. SARS-CoV-2 sequences in 2021-2022 from a nationwide study were included. The proportion of predominant lineages in Estonian regions and among travel-related cases was described by multinomial logistic regression. Simpson's indices of diversity were compared using linear regression. Dynamics of Bray-Curtis dissimilarity was described by applying fuzzy clustering to non-metrical dimensional scaling results. A total of 2,630 sequences from children (
ISSN:	1932-6203 1932-6203
DOI:	10.1371/journal.pone.0316213