AC-PCoA: Adjustment for confounding factors using principal coordinate analysis

Confounding factors exist widely in various biological data owing to technical variations, population structures and experimental conditions. Such factors may mask the true signals and lead to spurious associations in the respective biological data, making it necessary to adjust confounding factors...

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Veröffentlicht in:PLoS computational biology 2022-07, Vol.18 (7), p.e1010184-e1010184
Hauptverfasser: Wang, Yu, Sun, Fengzhu, Lin, Wei, Zhang, Shuqin
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Sprache:eng
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Zusammenfassung:Confounding factors exist widely in various biological data owing to technical variations, population structures and experimental conditions. Such factors may mask the true signals and lead to spurious associations in the respective biological data, making it necessary to adjust confounding factors accordingly. However, existing confounder correction methods were mainly developed based on the original data or the pairwise Euclidean distance, either one of which is inadequate for analyzing different types of data, such as sequencing data.
ISSN:1553-7358
1553-734X
1553-7358
DOI:10.1371/journal.pcbi.1010184