Influence of genetic variation on plasma protein levels in older adults using a multi-analyte panel

Proteins, widely studied as potential biomarkers, play important roles in numerous physiological functions and diseases. Genetic variation may modulate corresponding protein levels and point to the role of these variants in disease pathophysiology. Effects of individual single nucleotide polymorphis...

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Veröffentlicht in:PloS one 2013-07, Vol.8 (7), p.e70269-e70269
Hauptverfasser: Kim, Sungeun, Swaminathan, Shanker, Inlow, Mark, Risacher, Shannon L, Nho, Kwangsik, Shen, Li, Foroud, Tatiana M, Petersen, Ronald C, Aisen, Paul S, Soares, Holly, Toledo, Jon B, Shaw, Leslie M, Trojanowski, John Q, Weiner, Michael W, McDonald, Brenna C, Farlow, Martin R, Ghetti, Bernardino, Saykin, Andrew J
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Sprache:eng
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Zusammenfassung:Proteins, widely studied as potential biomarkers, play important roles in numerous physiological functions and diseases. Genetic variation may modulate corresponding protein levels and point to the role of these variants in disease pathophysiology. Effects of individual single nucleotide polymorphisms (SNPs) within a gene were analyzed for corresponding plasma protein levels using genome-wide association study (GWAS) genotype data and proteomic panel data with 132 quality-controlled analytes from 521 Caucasian participants in the Alzheimer's Disease Neuroimaging Initiative (ADNI) cohort. Linear regression analysis detected 112 significant (Bonferroni threshold p=2.44×10(-5)) associations between 27 analytes and 112 SNPs. 107 out of these 112 associations were tested in the Indiana Memory and Aging Study (IMAS) cohort for replication and 50 associations were replicated at uncorrected p
ISSN:1932-6203
1932-6203
DOI:10.1371/journal.pone.0070269