The association between 38 previously reported polymorphisms and psoriasis in a Polish population: High predicative accuracy of a genetic risk score combining 16 loci

To confirm the association of previously discovered psoriasis (Ps) risk loci with the disease in a Polish population and to create predictive models based on the combination of these single nucleotide polymorphisms (SNPs). Thirty-eight SNPs were genotyped in 480 Ps patients and 490 controls. Alleles...

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Veröffentlicht in:PloS one 2017-06, Vol.12 (6), p.e0179348-e0179348
Hauptverfasser: Kisiel, Bartłomiej, Kisiel, Katarzyna, Szymański, Konrad, Mackiewicz, Wojciech, Biało-Wójcicka, Ewelina, Uczniak, Sebastian, Fogtman, Anna, Iwanicka-Nowicka, Roksana, Koblowska, Marta, Kossowska, Helena, Placha, Grzegorz, Sykulski, Maciej, Bachta, Artur, Tłustochowicz, Witold, Płoski, Rafał, Kaszuba, Andrzej
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Sprache:eng
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Zusammenfassung:To confirm the association of previously discovered psoriasis (Ps) risk loci with the disease in a Polish population and to create predictive models based on the combination of these single nucleotide polymorphisms (SNPs). Thirty-eight SNPs were genotyped in 480 Ps patients and 490 controls. Alleles distributions were compared between patients and controls, as well as between different Ps sub-phenotypes. The genetic risk score (GRS) was calculated to assess the cumulative risk conferred by multiple loci. We confirmed associations of several loci with Ps: HLA-C, REL, IL12B, TRIM39/RPP21, POU5F1, MICA. The analysis of ROC curves showed that GRS combining 16 SNPs at least nominally (uncorrected P
ISSN:1932-6203
1932-6203
DOI:10.1371/journal.pone.0179348