Genome sequence and analysis of Buzura suppressaria nucleopolyhedrovirus: a group II Alphabaculovirus

Genome sequence and analysis of Buzura suppressaria nucleopolyhedrovirus: a group II Alphabaculovirus

The genome of Buzura suppressaria nucleopolyhedrovirus (BusuNPV) was sequenced by 454 pyrosequencing technology. The size of the genome is 120,420 bp with 36.8% G+C content. It contains 127 hypothetical open reading frames (ORFs) covering 90.7% of the genome and includes the 37 conserved baculovirus...

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Veröffentlicht in:PloS one 2014-01, Vol.9 (1), p.e86450-e86450
Hauptverfasser: Zhu, Zheng, Yin, Feifei, Liu, Xiaoping, Hou, Dianhai, Wang, Jun, Zhang, Lei, Arif, Basil, Wang, Hualin, Deng, Fei, Hu, Zhihong
Format: Artikel
Sprache:eng
Schlagworte:
Animals
Baculovirus
Base Composition
Base Sequence
Bioinformatics
Biology
Conserved Sequence
Fibroblasts
Gene sequencing
Genes
Genes, Viral
Genome Size
Genome, Viral
Genomes
Genomics
Growth factors
Helicoverpa armigera
High-Throughput Nucleotide Sequencing
Homology
Laboratories
Lepidoptera
Molecular Sequence Annotation
Molecular Sequence Data
Moths - virology
Nucleopolyhedroviruses - chemistry
Nucleopolyhedroviruses - classification
Nucleopolyhedroviruses - genetics
Nucleotide sequence
Open Reading Frames
Phylogeny
Proteins
Virology
Viruses
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Zusammenfassung:The genome of Buzura suppressaria nucleopolyhedrovirus (BusuNPV) was sequenced by 454 pyrosequencing technology. The size of the genome is 120,420 bp with 36.8% G+C content. It contains 127 hypothetical open reading frames (ORFs) covering 90.7% of the genome and includes the 37 conserved baculovirus core genes, 84 genes found in other baculoviruses, and 6 unique ORFs. No typical baculoviral homologous repeats (hrs) were present but the genome contained a region of repeated sequences. Gene Parity Plots revealed a 28.8 kb region conserved among the alpha- and beta-baculoviruses. Overall comparisons of BusuNPV to other baculoviruses point to a distinct species in group II Alphabaculovirus.
ISSN:1932-6203
1932-6203
DOI:10.1371/journal.pone.0086450