A massively-parallel electronic-structure calculations based on real-space density functional theory

Based on the real-space finite-difference method, we have developed a first-principles density functional program that efficiently performs large-scale calculations on massively-parallel computers. In addition to efficient parallel implementation, we also implemented several computational improvemen...

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Veröffentlicht in:Journal of computational physics 2010-03, Vol.229 (6), p.2339-2363
Hauptverfasser: Iwata, Jun-Ichi, Takahashi, Daisuke, Oshiyama, Atsushi, Boku, Taisuke, Shiraishi, Kenji, Okada, Susumu, Yabana, Kazuhiro
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Sprache:eng
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Zusammenfassung:Based on the real-space finite-difference method, we have developed a first-principles density functional program that efficiently performs large-scale calculations on massively-parallel computers. In addition to efficient parallel implementation, we also implemented several computational improvements, substantially reducing the computational costs of O ( N 3 ) operations such as the Gram–Schmidt procedure and subspace diagonalization. Using the program on a massively-parallel computer cluster with a theoretical peak performance of several TFLOPS, we perform electronic-structure calculations for a system consisting of over 10,000 Si atoms, and obtain a self-consistent electronic-structure in a few hundred hours. We analyze in detail the costs of the program in terms of computation and of inter-node communications to clarify the efficiency, the applicability, and the possibility for further improvements.
ISSN:0021-9991
1090-2716
DOI:10.1016/j.jcp.2009.11.038