ECO, the Evidence & Conclusion Ontology: community standard for evidence information

The Evidence and Conclusion Ontology (ECO) contains terms (classes) that describe types of evidence and assertion methods. ECO terms are used in the process of biocuration to capture the evidence that supports biological assertions (e.g. gene product X has function Y as supported by evidence Z). Cap...

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Veröffentlicht in:Nucleic acids research 2018-11, Vol.47 (D1)
Hauptverfasser: Giglio, Michelle, Tauber, Rebecca, Nadendla, Suvarna, Munro, James, Olley, Dustin, Ball, Shoshannah, Mitraka, Elvira, Schriml, Lynn M., Gaudet, Pascale, Hobbs, Elizabeth T., Erill, Ivan, Siegele, Deborah A., Hu, James C., Mungall, Chris, Chibucos, Marcus C.
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Sprache:eng
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Zusammenfassung:The Evidence and Conclusion Ontology (ECO) contains terms (classes) that describe types of evidence and assertion methods. ECO terms are used in the process of biocuration to capture the evidence that supports biological assertions (e.g. gene product X has function Y as supported by evidence Z). Capture of this information allows tracking of annotation provenance, establishment of quality control measures and query of evidence. ECO contains over 1500 terms and is in use by many leading biological resources including the Gene Ontology, UniProt and several model organism databases. ECO is continually being expanded and revised based on the needs of the biocuration community.
ISSN:0305-1048
1362-4962