High-quality draft genome sequence of Ensifer meliloti Mlalz-1, a microsymbiont of Medicago laciniata (L.) miller collected in Lanzarote, Canary Islands, Spain
Abstract Ensifer meliloti Mlalz-1 (INSDC = ATZD00000000 ) is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an effective nitrogen-fixing nodule of Medicago laciniata (L.) Miller from a soil sample collected near the town of Guatiza on the island of Lanzarote, the...
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Veröffentlicht in: | Standards in genomic sciences 2017-09, Vol.12 (1) |
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Zusammenfassung: | Abstract
Ensifer meliloti
Mlalz-1 (INSDC =
ATZD00000000
) is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an effective nitrogen-fixing nodule of
Medicago laciniata
(L.) Miller from a soil sample collected near the town of Guatiza on the island of Lanzarote, the Canary Islands, Spain. This strain nodulates and forms an effective symbiosis with the highly specific host
M. laciniata
. This rhizobial genome was sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) sequencing project. Here the features of
E. meliloti
Mlalz-1 are described, together with high-quality permanent draft genome sequence information and annotation. The 6,664,116 bp high-quality draft genome is arranged in 99 scaffolds of 100 contigs, containing 6314 protein-coding genes and 74 RNA-only encoding genes. Strain Mlalz-1 is closely related to
Ensifer meliloti
IAM 12611
T
,
Ensifer medicae
A 321
T
and
Ensifer numidicus
ORS 1407
T
, based on 16S rRNA gene sequences. gANI values of ≥98.1% support the classification of strain Mlalz-1 as
E. meliloti
. Nodulation of
M. laciniata
requires a specific
nodC
allele, and the
nodC
gene of strain Mlalz-1 shares ≥98% sequence identity with
nodC
of
M. laciniata
-nodulating
Ensifer
strains, but ≤93% with
nodC
of
Ensifer
strains that nodulate other
Medicago
species. Strain Mlalz-1 is unique among sequenced |
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ISSN: | 1944-3277 1944-3277 |