Genome-Wide Sequencing of 41 Rice (Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation
Fast-neutron (FN) irradiation has been used to create mutagen-ized collections of many plant species (Bolon et al., 2014). FN-induced mutagenesis has clear advantages: it is an efficientmeans of saturating the genome, and it does not involve time-consuming plant transformation or tissue culture. In...
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| Veröffentlicht in: | Molecular plant 2016-07, Vol.9 (7), p.1078-1081 |
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| creator | Li, Guotian Chern, Mawsheng Jain, Rashmi Martin, Joel A. Schackwitz, Wendy S. Jiang, Liangrong Vega-Sánchez, Miguel E. Lipzen, Anna M. Barry, Kerrie W. Schmutz, Jeremy Ronald, Pamela C. |
| description | Fast-neutron (FN) irradiation has been used to create mutagen-ized collections of many plant species (Bolon et al., 2014). FN-induced mutagenesis has clear advantages: it is an efficientmeans of saturating the genome, and it does not involve time-consuming plant transformation or tissue culture. In rice, mostmutant collections, although highly valuable, were generated us-ing either T-DNA insertion or transposon tagging approaches thatoften induce mutations unlinked to the insertion and complicatinganalysis (Wang et al., 2013). Another disadvantage of some ofthese collections is that they were created in rice varieties thatare photoperiod-sensitive and often have long generation times. |
| doi_str_mv | 10.1016/j.molp.2016.03.009 |
| format | Article |
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Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation</title><source>MEDLINE</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>Alma/SFX Local Collection</source><creator>Li, Guotian ; Chern, Mawsheng ; Jain, Rashmi ; Martin, Joel A. ; Schackwitz, Wendy S. ; Jiang, Liangrong ; Vega-Sánchez, Miguel E. ; Lipzen, Anna M. ; Barry, Kerrie W. ; Schmutz, Jeremy ; Ronald, Pamela C.</creator><creatorcontrib>Li, Guotian ; Chern, Mawsheng ; Jain, Rashmi ; Martin, Joel A. ; Schackwitz, Wendy S. ; Jiang, Liangrong ; Vega-Sánchez, Miguel E. ; Lipzen, Anna M. ; Barry, Kerrie W. ; Schmutz, Jeremy ; Ronald, Pamela C. ; Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)</creatorcontrib><description>Fast-neutron (FN) irradiation has been used to create mutagen-ized collections of many plant species (Bolon et al., 2014). FN-induced mutagenesis has clear advantages: it is an efficientmeans of saturating the genome, and it does not involve time-consuming plant transformation or tissue culture. In rice, mostmutant collections, although highly valuable, were generated us-ing either T-DNA insertion or transposon tagging approaches thatoften induce mutations unlinked to the insertion and complicatinganalysis (Wang et al., 2013). Another disadvantage of some ofthese collections is that they were created in rice varieties thatare photoperiod-sensitive and often have long generation times.</description><identifier>ISSN: 1674-2052</identifier><identifier>EISSN: 1752-9867</identifier><identifier>DOI: 10.1016/j.molp.2016.03.009</identifier><identifier>PMID: 27018389</identifier><language>eng</language><publisher>England: Elsevier Inc</publisher><subject>BASIC BIOLOGICAL SCIENCES ; Fast Neutrons ; Genome, Plant - genetics ; Genome, Plant - radiation effects ; Mutation - genetics ; Mutation - radiation effects ; Oryza - genetics ; Oryza - radiation effects ; Sequence Analysis, DNA</subject><ispartof>Molecular plant, 2016-07, Vol.9 (7), p.1078-1081</ispartof><rights>2016 The Author</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c493t-b17ec59e8f2f9b4f1a561cfbc1dcb18ba7709323ec0662b273abdfca8c6610b63</citedby><cites>FETCH-LOGICAL-c493t-b17ec59e8f2f9b4f1a561cfbc1dcb18ba7709323ec0662b273abdfca8c6610b63</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27018389$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/biblio/1460494$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Li, Guotian</creatorcontrib><creatorcontrib>Chern, Mawsheng</creatorcontrib><creatorcontrib>Jain, Rashmi</creatorcontrib><creatorcontrib>Martin, Joel A.</creatorcontrib><creatorcontrib>Schackwitz, Wendy S.</creatorcontrib><creatorcontrib>Jiang, Liangrong</creatorcontrib><creatorcontrib>Vega-Sánchez, Miguel E.</creatorcontrib><creatorcontrib>Lipzen, Anna M.</creatorcontrib><creatorcontrib>Barry, Kerrie W.</creatorcontrib><creatorcontrib>Schmutz, Jeremy</creatorcontrib><creatorcontrib>Ronald, Pamela C.</creatorcontrib><creatorcontrib>Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)</creatorcontrib><title>Genome-Wide Sequencing of 41 Rice (Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation</title><title>Molecular plant</title><addtitle>Mol Plant</addtitle><description>Fast-neutron (FN) irradiation has been used to create mutagen-ized collections of many plant species (Bolon et al., 2014). FN-induced mutagenesis has clear advantages: it is an efficientmeans of saturating the genome, and it does not involve time-consuming plant transformation or tissue culture. In rice, mostmutant collections, although highly valuable, were generated us-ing either T-DNA insertion or transposon tagging approaches thatoften induce mutations unlinked to the insertion and complicatinganalysis (Wang et al., 2013). Another disadvantage of some ofthese collections is that they were created in rice varieties thatare photoperiod-sensitive and often have long generation times.</description><subject>BASIC BIOLOGICAL SCIENCES</subject><subject>Fast Neutrons</subject><subject>Genome, Plant - genetics</subject><subject>Genome, Plant - radiation effects</subject><subject>Mutation - genetics</subject><subject>Mutation - radiation effects</subject><subject>Oryza - genetics</subject><subject>Oryza - radiation effects</subject><subject>Sequence Analysis, DNA</subject><issn>1674-2052</issn><issn>1752-9867</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kc1u1DAUhSMEoqXwAiyQxapdJPgn4zgSG1TaMtJApQJiafnnBjya2FPbGWnY8Oo4pLBk5Sv5O0dX96uqlwQ3BBP-ZtuMYbdvaJkbzBqM-0fVKelWtO4F7x6XmXdtTfGKnlTPUtpizLHg7Gl1QjtMBBP9afXrBnwYof7mLKDPcD-BN85_R2FALUF3zgA6v43Hnwolld1BoU1zgT5OWWWwaOM8JHQHB1C7hN67A8QEy68LPqG1t5MpnD6ia5Vy_QmmHINH6xiVdX-g59WToYThxcN7Vn29vvpy-aHe3N6sL99tatP2LNeadGBWPYiBDr1uB6JWnJhBG2KNJkKrrsM9owwM5pxq2jGl7WCUMJwTrDk7q14vvSFlJ5NxGcwPE7wHkyVpOW77tkDnC7SPoVwiZTm6ZGC3Ux7ClCQRuDQLgVlB6YKaGFKKMMh9dKOKR0mwnO3IrZztyNmOxEwWOyX06qF_0iPYf5G_OgrwdgGgnOLgIM6bFiNgXZwXtcH9r_839z-g6A</recordid><startdate>20160706</startdate><enddate>20160706</enddate><creator>Li, Guotian</creator><creator>Chern, Mawsheng</creator><creator>Jain, Rashmi</creator><creator>Martin, Joel A.</creator><creator>Schackwitz, Wendy S.</creator><creator>Jiang, Liangrong</creator><creator>Vega-Sánchez, Miguel E.</creator><creator>Lipzen, Anna M.</creator><creator>Barry, Kerrie W.</creator><creator>Schmutz, Jeremy</creator><creator>Ronald, Pamela C.</creator><general>Elsevier Inc</general><general>Elsevier</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>OTOTI</scope></search><sort><creationdate>20160706</creationdate><title>Genome-Wide Sequencing of 41 Rice (Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation</title><author>Li, Guotian ; Chern, Mawsheng ; Jain, Rashmi ; Martin, Joel A. ; Schackwitz, Wendy S. ; Jiang, Liangrong ; Vega-Sánchez, Miguel E. ; Lipzen, Anna M. ; Barry, Kerrie W. ; Schmutz, Jeremy ; Ronald, Pamela C.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c493t-b17ec59e8f2f9b4f1a561cfbc1dcb18ba7709323ec0662b273abdfca8c6610b63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>BASIC BIOLOGICAL SCIENCES</topic><topic>Fast Neutrons</topic><topic>Genome, Plant - genetics</topic><topic>Genome, Plant - radiation effects</topic><topic>Mutation - genetics</topic><topic>Mutation - radiation effects</topic><topic>Oryza - genetics</topic><topic>Oryza - radiation effects</topic><topic>Sequence Analysis, DNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Li, Guotian</creatorcontrib><creatorcontrib>Chern, Mawsheng</creatorcontrib><creatorcontrib>Jain, Rashmi</creatorcontrib><creatorcontrib>Martin, Joel A.</creatorcontrib><creatorcontrib>Schackwitz, Wendy S.</creatorcontrib><creatorcontrib>Jiang, Liangrong</creatorcontrib><creatorcontrib>Vega-Sánchez, Miguel E.</creatorcontrib><creatorcontrib>Lipzen, Anna M.</creatorcontrib><creatorcontrib>Barry, Kerrie W.</creatorcontrib><creatorcontrib>Schmutz, Jeremy</creatorcontrib><creatorcontrib>Ronald, Pamela C.</creatorcontrib><creatorcontrib>Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>OSTI.GOV</collection><jtitle>Molecular plant</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Li, Guotian</au><au>Chern, Mawsheng</au><au>Jain, Rashmi</au><au>Martin, Joel A.</au><au>Schackwitz, Wendy S.</au><au>Jiang, Liangrong</au><au>Vega-Sánchez, Miguel E.</au><au>Lipzen, Anna M.</au><au>Barry, Kerrie W.</au><au>Schmutz, Jeremy</au><au>Ronald, Pamela C.</au><aucorp>Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genome-Wide Sequencing of 41 Rice (Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation</atitle><jtitle>Molecular plant</jtitle><addtitle>Mol Plant</addtitle><date>2016-07-06</date><risdate>2016</risdate><volume>9</volume><issue>7</issue><spage>1078</spage><epage>1081</epage><pages>1078-1081</pages><issn>1674-2052</issn><eissn>1752-9867</eissn><abstract>Fast-neutron (FN) irradiation has been used to create mutagen-ized collections of many plant species (Bolon et al., 2014). FN-induced mutagenesis has clear advantages: it is an efficientmeans of saturating the genome, and it does not involve time-consuming plant transformation or tissue culture. In rice, mostmutant collections, although highly valuable, were generated us-ing either T-DNA insertion or transposon tagging approaches thatoften induce mutations unlinked to the insertion and complicatinganalysis (Wang et al., 2013). Another disadvantage of some ofthese collections is that they were created in rice varieties thatare photoperiod-sensitive and often have long generation times.</abstract><cop>England</cop><pub>Elsevier Inc</pub><pmid>27018389</pmid><doi>10.1016/j.molp.2016.03.009</doi><tpages>4</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | BASIC BIOLOGICAL SCIENCES Fast Neutrons Genome, Plant - genetics Genome, Plant - radiation effects Mutation - genetics Mutation - radiation effects Oryza - genetics Oryza - radiation effects Sequence Analysis, DNA |
| title | Genome-Wide Sequencing of 41 Rice (Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation |
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