Hahyoungchilella caricis gen. nov., sp. nov., isolated from a rhizosphere mudflat of a halophyte (Carex scabrifolia), transfer of Thioclava arenosa Thongphrom et al. 2017 to Pseudothioclava as Pseudothioclava arenosa gen. nov., comb. nov. and proposal of Thioclava electrotropha Chang et al. 2018 as a later heterosynonym of Thioclava sediminum
A Gram-stain-negative strictly aerobic, marine bacterium, designated GH2-2 T , was isolated from a rhizosphere mudflat of a halophyte ( Carex scabrifolia ) in Gangwha Island, the Republic of Korea. The cells of the organism were oxidase-positive, catalase-positive, flagellated, short rods that grew...
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Veröffentlicht in: | The journal of microbiology 2019, 57(12), , pp.1048-1055 |
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Zusammenfassung: | A Gram-stain-negative strictly aerobic, marine bacterium, designated GH2-2
T
, was isolated from a rhizosphere mudflat of a halophyte (
Carex scabrifolia
) in Gangwha Island, the Republic of Korea. The cells of the organism were oxidase-positive, catalase-positive, flagellated, short rods that grew at 10–40°C, pH 4–10, and 0–13% (w/v) NaCl. The predominant ubiquinone was Q-10. The major polar lipids were phosphatidylcholine, phosphatidylethanolamine, and phosphatidylglycerol. The major fatty acid is C
18:1
. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the novel isolate formed an independent lineage at the base of the radiation encompassing members of the genus
Thioclava
, except for
Thioclava arenosa
. The closest relatives were
T. nitratireducens
(96.03% sequence similarity) and
T. dalianensis
(95.97%). The genome size and DNA G+C content were 3.77 Mbp and 59.6 mol%, respectively. Phylogenomic analysis supported phylogenetic distinctness based on 16S rRNA gene sequences. Average nucleotide identity values were 73.6–74.0% between the novel strain and members of the genus
Thioclava
. On the basis of data obtained from a polyphasic approach, the strain GH2-2
T
(= KCTC 62124
T
= DSM 105743) represents a novel species of a new genus for which the name
Hahyoungchilella caricis
gen. nov., sp. nov. is proposed. Moreover, the transfer of
Thioclava arenosa
Thongphrom
et al.
2017 to
Pseudothioclava
gen. nov. as
Pseudothioclava arenosa
comb. nov. is also proposed. Finally,
Thioclava electrotropha
Chang
et al.
2018 is proposed to be a later heterosynonym of
Thioclava sediminum
Liu
et al.
2017. |
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ISSN: | 1225-8873 1976-3794 |
DOI: | 10.1007/s12275-019-9260-y |