Analysis of Expressed Sequence Tags from the Antarctic Psychrophilic Green Algae, Pyramimonas gelidicola

Expressed sequence tags (ESTs) from the Antarctic green algae Pyramimonas gelidicola were analyzed to obtain molecular information on cold acclimation of psychrophilic microorganisms. A total of 2,112 EST clones were sequenced, generating 222 contigs and 219 singletons, and 200 contigs and 391 singl...

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Veröffentlicht in:	Journal of microbiology and biotechnology 2012, 22(7), , pp.902-906
Hauptverfasser:	Jung, W.S., Korea Polar Research Institute, Incheon, Republic of Korea, Lee, S.G., Korea Polar Research Institute, Incheon, Republic of Korea, Kang, S.W., Inje University, Busan, Republic of Korea, Lee, Y.S., Inje University, Busan, Republic of Korea, Lee, J.H., Korea Polar Research Institute, Incheon, Republic of Korea, Kang, S.H., University of Science and Technology, Incheon, Republic of Korea, Jin, E.S., Hanyang University, Seoul, Republic of Korea, Kim, H.J., Korea Polar Research Institute, Incheon, Republic of Korea
Format:	Artikel
Sprache:	eng
Schlagworte:	Antarctic Antarctic Regions BANQUE DE DONNEES BASES DE DATOS Biological and medical sciences Biotechnology Chlorophyta - genetics Chlorophyta - physiology Chlorophyta - radiation effects Cold Temperature Expressed Sequence Tags Fundamental and applied biological sciences. Psychology Gene Expression Profiling Molecular Sequence Data psychrophilic Pyramimonas gelidicola Sequence Analysis, DNA Stress, Physiological 생물학
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Zusammenfassung:	Expressed sequence tags (ESTs) from the Antarctic green algae Pyramimonas gelidicola were analyzed to obtain molecular information on cold acclimation of psychrophilic microorganisms. A total of 2,112 EST clones were sequenced, generating 222 contigs and 219 singletons, and 200 contigs and 391 singletons from control (4℃) and cold-shock conditions (-2℃), respectively. The complete EST sequences were deposited to the DDBJ EST database (http://www.ddbinig.ac.jp/index-e.html) and the nucleotide sequences reported in this study are available in the DDBJ/EMBL/GenBank. These EST databases of Antarctic green algae can be used in a wide range of studies on psychrophilic genes expressed by polar microorganisms.
ISSN:	1017-7825 1738-8872
DOI:	10.4014/jmb.1201.01002