An Isochore Map of the Human Genome Based on the GCDT Method

An Isochore Map of the Human Genome Based on the GCDT Method

Due to the isochore structures associate with many important biological functions, a good segment algorithm for the isochore boundaries will provide much insight into the understanding of the human genome. The isochore map of human genome has been obtained by an algorithm based on the technique of G...

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Bibliographische Detailangaben
Hauptverfasser: Anhui Wang, Guiran Chang, Xuegong Deng, Xingbo Zhao
Format: Tagungsbericht
Sprache:eng
Schlagworte:
Animal structures
Bioinformatics
Biological cells
chromosome
GC content
GCDT
Genomics
Humans
Information processing
isochore
Laboratories
Partitioning algorithms
Sequences
Visualization
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Beschreibung
Zusammenfassung:Due to the isochore structures associate with many important biological functions, a good segment algorithm for the isochore boundaries will provide much insight into the understanding of the human genome. The isochore map of human genome has been obtained by an algorithm based on the technique of GCDT in this paper. The obtained boundaries match well with the GCDT images in visualization. The human genome has very clear isochore structures.
DOI:10.1109/APCIP.2009.225