Water-biomolecule clusters studied by photoemission spectroscopy and multilevel atomistic simulations: hydration or solvation?

The properties of mixed water-uracil nanoaggregates have been probed by core electron-photoemission measurements to investigate supramolecular assembly in the gas phase driven by weak interactions. The interpretation of the measurements has been assisted by multilevel atomistic simulations, based on...

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Veröffentlicht in:Physical chemistry chemical physics : PCCP 2021-07, Vol.23 (28), p.1549-1558
Hauptverfasser: Mattioli, Giuseppe, Avaldi, Lorenzo, Bolognesi, Paola, Bozek, John D, Castrovilli, Mattea C, Chiarinelli, Jacopo, Domaracka, Alicja, Indrajith, Suvasthika, Maclot, Sylvain, Milosavljevi, Aleksandar R, Nicolafrancesco, Chiara, Rousseau, Patrick
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Sprache:eng
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Zusammenfassung:The properties of mixed water-uracil nanoaggregates have been probed by core electron-photoemission measurements to investigate supramolecular assembly in the gas phase driven by weak interactions. The interpretation of the measurements has been assisted by multilevel atomistic simulations, based on semi-empirical tight-binding and DFT-based methods. Our protocol established a positive-feedback loop between experimental and computational techniques, which has enabled a sound and detailed atomistic description of such complex heterogeneous molecular aggregates. Among biomolecules, uracil offers interesting and generalized skeletal features; its structure encompasses an alternation of hydrophilic H-bond donor and acceptor sites and hydrophobic moieties, typical in biomolecular systems, that induces a supramolecular core-shell-like organization of the mixed clusters with a water core and an uracil shell. This structure is far from typical models of both solid-state hydration, with water molecules in defined positions, or liquid solvation, where disconnected uracil molecules are completely surrounded by water. The self-organization patterns unravelled for the water-uracil clusters may disclose new routes for controlling the delivery of precise amount of molecular blends via the insertion in a controlled environment, preserving their size and composition.
ISSN:1463-9076
1463-9084
DOI:10.1039/d1cp02031e