metal transporter PgIREG1 from the hyperaccumulator Psychotria gabriellae is a candidate gene for nickel tolerance and accumulation
We used RNA-Seq to sequence the transcriptome of the nickel hyperaccumulator Psychotria gabriellae endemic from New Caledonia. Using these sequences, we identified the PgIREG1 transporter as a candidate gene for nickel hyperaccumulation.
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| Veröffentlicht in: | Journal of experimental botany 2014-04, Vol.65 (6), p.1551-1564 |
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| container_issue | 6 |
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| container_title | Journal of experimental botany |
| container_volume | 65 |
| creator | Merlot, Sylvain Hannibal, Laure Martins, Sara Martinelli, Laëtitia Amir, Hamid Lebrun, Michel Thomine, Sébastien |
| description | We used RNA-Seq to sequence the transcriptome of the nickel hyperaccumulator Psychotria gabriellae endemic from New Caledonia. Using these sequences, we identified the PgIREG1 transporter as a candidate gene for nickel hyperaccumulation. |
| doi_str_mv | 10.1093/jxb/eru025 |
| format | Article |
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Using these sequences, we identified the PgIREG1 transporter as a candidate gene for nickel hyperaccumulation.</description><subject>Amino Acid Sequence</subject><subject>Arabidopsis - cytology</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis - growth & development</subject><subject>Arabidopsis - metabolism</subject><subject>Base Sequence</subject><subject>Cation Transport Proteins - genetics</subject><subject>Cation Transport Proteins - metabolism</subject><subject>Earth Sciences</subject><subject>Gene expression</subject><subject>Genes</subject><subject>Genes, Reporter</subject><subject>High-Throughput Nucleotide Sequencing</subject><subject>Hyperaccumulators</subject><subject>Iron</subject><subject>Manganese</subject><subject>Metals - metabolism</subject><subject>Molecular Sequence Annotation</subject><subject>Molecular Sequence Data</subject><subject>Mutation</subject><subject>Nickel</subject><subject>Nickel - metabolism</subject><subject>Phylogeny</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Plant roots</subject><subject>Plant Roots - genetics</subject><subject>Plant Roots - growth & development</subject><subject>Plant Roots - metabolism</subject><subject>Plants, Genetically Modified</subject><subject>Proteins</subject><subject>Psychotria</subject><subject>Psychotria - genetics</subject><subject>Psychotria - metabolism</subject><subject>RESEARCH PAPER</subject><subject>Sciences of the Universe</subject><subject>Sequence Analysis, DNA</subject><subject>Substrate Specificity</subject><subject>Transcriptome</subject><subject>Transcriptomes</subject><subject>Vacuoles - metabolism</subject><subject>Yeasts</subject><issn>0022-0957</issn><issn>1460-2431</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNks1v1DAQxS0Eokvhwh3wEZBCx1_5OFZVaSutBAJ6thxnsusliRfbQeyZfxyvUlYcmYslv5-fx_NMyEsGHxg04mL3q73AMANXj8iKyRIKLgV7TFYAnBfQqOqMPItxBwAKlHpKzrhU-aSEFfk9YjIDTcFMce9DwkA_b-6-XN8w2gc_0rRFuj3sMRhr53EeTPKZiAe79Sk4QzemDQ6HwSB1kRpqzdS5ziSkG5yQ9pmenP2O-Qo_ZJfJIs0IPdk5Pz0nT3ozRHzxsJ6T-4_X365ui_Wnm7ury3VhFfBUKKlq2YpKKSmw4sf-W1bVaJjtbAOoVGsZ1rls1QopeCd6qEqsQJiqhVKck3eL79YMeh_caMJBe-P07eVaH_dA5GJl_ZNl9u3C7oP_MWNMenTRHh86oZ-jZirPuCkVh_9AGRMNF43I6PsFtcHHGLA_tcFAH7PUOUu9ZJnh1w--cztid0L_hpeBVwuwizmVf3SQQtYy628WvTdem01wUd9_5cBU_gh5cLIRfwD-Q608</recordid><startdate>20140401</startdate><enddate>20140401</enddate><creator>Merlot, Sylvain</creator><creator>Hannibal, Laure</creator><creator>Martins, Sara</creator><creator>Martinelli, Laëtitia</creator><creator>Amir, Hamid</creator><creator>Lebrun, Michel</creator><creator>Thomine, Sébastien</creator><general>Oxford University Press [etc.]</general><general>Oxford University Press</general><general>Oxford University Press (OUP)</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>1XC</scope><orcidid>https://orcid.org/0000-0001-7814-6657</orcidid></search><sort><creationdate>20140401</creationdate><title>metal transporter PgIREG1 from the hyperaccumulator Psychotria gabriellae is a candidate gene for nickel tolerance and accumulation</title><author>Merlot, Sylvain ; 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| ispartof | Journal of experimental botany, 2014-04, Vol.65 (6), p.1551-1564 |
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| source | MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Jstor Complete Legacy; Oxford University Press Journals All Titles (1996-Current); Alma/SFX Local Collection |
| subjects | Amino Acid Sequence Arabidopsis - cytology Arabidopsis - genetics Arabidopsis - growth & development Arabidopsis - metabolism Base Sequence Cation Transport Proteins - genetics Cation Transport Proteins - metabolism Earth Sciences Gene expression Genes Genes, Reporter High-Throughput Nucleotide Sequencing Hyperaccumulators Iron Manganese Metals - metabolism Molecular Sequence Annotation Molecular Sequence Data Mutation Nickel Nickel - metabolism Phylogeny Plant Proteins - genetics Plant Proteins - metabolism Plant roots Plant Roots - genetics Plant Roots - growth & development Plant Roots - metabolism Plants, Genetically Modified Proteins Psychotria Psychotria - genetics Psychotria - metabolism RESEARCH PAPER Sciences of the Universe Sequence Analysis, DNA Substrate Specificity Transcriptome Transcriptomes Vacuoles - metabolism Yeasts |
| title | metal transporter PgIREG1 from the hyperaccumulator Psychotria gabriellae is a candidate gene for nickel tolerance and accumulation |
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