Phoenicibacter congonensis gen. nov., sp. nov., a new genus isolated from the human gut and its description using a taxonogenomic approach

Culturomics has recently allowed the isolation and description of previously uncultured bacteria from the human microbiome at different body sites. As part of a project aiming to describe the human gut microbiota by culturomics, Phoenicibacter congonensis strain Marseille-P3241 T was isolated from t...

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Veröffentlicht in:Antonie van Leeuwenhoek 2019-05, Vol.112 (5), p.775-784
Hauptverfasser: Bilen, Melhem, Fonkou, Maxime Descartes Mbogning, Caputo, Aurélia, Nguyen, Thi-Thien, Di Pinto, Fabrizio, Bittar, Fadi, Daoud, Ziad, Levasseur, Anthony, Fournier, Pierre Edouard, Raoult, Didier, Cadoret, Frédéric
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Sprache:eng
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Zusammenfassung:Culturomics has recently allowed the isolation and description of previously uncultured bacteria from the human microbiome at different body sites. As part of a project aiming to describe the human gut microbiota by culturomics, Phoenicibacter congonensis strain Marseille-P3241 T was isolated from the gut of a 45 years old Pygmy female. In the present work, we aim to describe this strain via the taxonogenomics approach. The major phenotypic, genomic and biochemical characteristics of this strain were analysed. Strain Marseille-P3241 T is an anaerobic, Gram-positive and motile coccobacillus that grows optimally at 37 °C. The genome of strain Marseille-P3241 T is 1,447,956 bp long with 43.44% GC content and its 16S rRNA gene sequence exhibited 89% sequence similarity with that of Denitrobacterium detoxificans strain NPOH1 T , the phylogenetically closest related species with current standing in nomenclature. After performing a phylogenetic and genomic analysis, we conclude that strain Marseille-P3241 T (= CCUG 70681 T  = CSUR P3241 T ) represents the type species of a new genus, for which we propose the name Phoenicibacter congonensis gen. nov., sp. nov.
ISSN:0003-6072
1572-9699
DOI:10.1007/s10482-018-01211-1