ENDscript: a workflow to display sequence and structure information

ENDscript is a web server grouping popular programs such as BLAST, Multalin and DSSP. It uses as query the co-ordinates file of a protein in Protein Data Bank format and generates PostScript and png figures showing: residues conserved after a multiple alignment against homologous sequences, secondar...

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Veröffentlicht in:Bioinformatics 2002-05, Vol.18 (5), p.767-768
Hauptverfasser: Gouet, Patrice, Courcelle, Emmanuel
Format: Artikel
Sprache:eng
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Zusammenfassung:ENDscript is a web server grouping popular programs such as BLAST, Multalin and DSSP. It uses as query the co-ordinates file of a protein in Protein Data Bank format and generates PostScript and png figures showing: residues conserved after a multiple alignment against homologous sequences, secondary structure elements, accessibility, hydropathy and intermolecular contacts. Thus, the user can relate quickly 1D, 2D and 3D information of a protein of known structure. Availability: http://genopole.toulouse.inra.fr/ENDscript Contact: p.gouet@ibcp.fr * To whom correspondence should be addressed.
ISSN:1367-4803
1460-2059
1367-4811
DOI:10.1093/bioinformatics/18.5.767