Transposon mutagenesis identifies genetic drivers of [Braf.sup.V600E] melanoma

Although nearly half of human melanomas harbor oncogenic [BRAf.sup.V600E] mutations, the genetic events that cooperate with these mutations to drive melanogenesis are still largely unknown. Here we show that Sleeping Beauty (SB) transposon-mediated mutagenesis drives melanoma progression in [BRAf.su...

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Veröffentlicht in:Nature genetics 2015-05, p.486
Hauptverfasser: Mann, Michael B, Black, Michael A, Jones, Devin J, Ward, Jerrold M, Yew, Christopher Chin Kuan, Newberg, Justin Y, Dupuy, Adam J, Rust, Alistair G, Bosenberg, Marcus W, McMahon, Martin, Print, Cristin G, Copeland, Neal G, Jenkins, Nancy A
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Sprache:eng
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Zusammenfassung:Although nearly half of human melanomas harbor oncogenic [BRAf.sup.V600E] mutations, the genetic events that cooperate with these mutations to drive melanogenesis are still largely unknown. Here we show that Sleeping Beauty (SB) transposon-mediated mutagenesis drives melanoma progression in [BRAf.sup.V600E] mutant mice and identify 1,232 recurrently mutated candidate cancer genes (CCGs) from 70 SB-driven melanomas. CCGs are enriched in Wnt, PI3K, MAPK and netrin signaling pathway components and are more highly connected to one another than predicted by chance, indicating that SB targets cooperative genetic networks in melanoma. Human orthologs of > 500 CCGs are enriched for mutations in human melanoma or showed statistically significant clinical associations between RNA abundance and survival of patients with metastatic melanoma. We also functionally validate CEP350 as a new tumor-suppressor gene in human melanoma. SB mutagenesis has thus helped to catalog the cooperative molecular mechanisms driving [BRAf.sup.V600E] melanoma and discover new genes with potential clinical importance in human melanoma.
ISSN:1061-4036
1546-1718
DOI:10.1038/ng.3275