The complete chloroplast genome of a centennial olive tree (Olea europaea, Oleaceae) from the southern Peruvian coast [version 1; peer review: awaiting peer review]
Olive ( Olea europaea Linaeus 1753) is one of the valuable fruit trees and very important edible oil plant in the world. The chloroplast (cp) genome of an olive tree ( Olea europaea) from the southern Peruvian arid coast was obtained for the first time. Genomic DNA of high quality was used to genera...
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Veröffentlicht in: | F1000 research 2024, Vol.13 |
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Hauptverfasser: | , , , , , , , , , |
Format: | Artikel |
Sprache: | eng |
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Zusammenfassung: | Olive (
Olea europaea Linaeus 1753) is one of the valuable fruit trees and very important edible oil plant in the world. The chloroplast (cp) genome of an olive tree (
Olea europaea) from the southern Peruvian arid coast was obtained for the first time. Genomic DNA of high quality was used to generate librarieswith Illumina Hiseq paired-end methods. The cp genome is 155,886 pb in length and contains a large single-copy region (LSC) of 86,610 pb and a small single copy region (SSC) of 17,790 pb separated by two inverted repeat (IR) regions (25,741bp). The cp genome of olive contains 124 genes that consists of 80 protein-coding genes, 36 tRNA, eight rRNA. Phylogenetic analysis showed this olive tree is sister to
O. europaea subsp.
maroccana (
Oleeae tribe). This study presents the first overview of the chloroplast genome organization and phylogenetics of
O. europaea, offering valuable insights for genetic and evolutionary research in the genus
Olea. |
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ISSN: | 2046-1402 |
DOI: | 10.12688/f1000research.155147.1 |