METHOD FOR PREDICTING GENE ONTOLOGY TERM BASED ON SEQUENCE SIMILARITY

PROBLEM TO BE SOLVED: To provide a method to make both recall values and accuracy values sufficiently higher than those in the conventional methods for the prediction of gene ontology terms based on sequence similarity. SOLUTION: Using a gene sequence whose gene ontology terms are known, gene ontolo...

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Hauptverfasser:	KIMURA KOICHI, UECHI JUNICHI
Format:	Patent
Sprache:	eng
Schlagworte:	BEER BIOCHEMISTRY CALCULATING CHEMISTRY COMPOSITIONS THEREOF COMPUTER SYSTEMS BASED ON SPECIFIC COMPUTATIONAL MODELS COMPUTING COUNTING CULTURE MEDIA ELECTRIC DIGITAL DATA PROCESSING ENZYMOLOGY METALLURGY MICROBIOLOGY MICROORGANISMS OR ENZYMES MUTATION OR GENETIC ENGINEERING PHYSICS PROPAGATING, PRESERVING OR MAINTAINING MICROORGANISMS SPIRITS VINEGAR WINE
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Beschreibung
Zusammenfassung:	PROBLEM TO BE SOLVED: To provide a method to make both recall values and accuracy values sufficiently higher than those in the conventional methods for the prediction of gene ontology terms based on sequence similarity. SOLUTION: Using a gene sequence whose gene ontology terms are known, gene ontology terms are predicted and the accuracy of the prediction is calculated while the requirements for the prediction are varied. The optimal requirements for the prediction are searched and/or determined. Using the optimal requirements for the prediction, the gene ontology terms are predicted. COPYRIGHT: (C)2005,JPO&NCIPI