Automatic anatomical feature identification and map segmentation

In one embodiment, a medical system includes a catheter configured to be inserted into a heart of a living subject, and including electrodes configured to capture electrical activity of the heart at respective position in the heart, a display, and processing circuitry configured to receive position signals from the catheter, and in response to the position signals compute the respective positions of the electrodes, generate an anatomical map responsively to respective ones of the computed positions, find an anatomical feature of the heart and a position of the anatomical feature responsively to the respective positions of, and electrical activity captured by, respective ones of the electrodes, automatically segment the anatomical map responsively to the found position of the anatomical feature, and render the anatomical map to the display.