Method for automatically deslugging an agricultural combine

A deslugging method and system for an agricultural combine (20), providing several semi- and fully automated operating modes or routines for removing or dislodging a slug of crop and/or other material from the threshing system (24) and/or a feeder of the combine (20) for conveying crop material to the threshing system (24). The routines can include reciprocating, agitating and jogging routines, which can be automatically altered during execution responsive to sensed or changing conditions, as processed by a suitable filter such as a simplified Kalman type signal filter, for generating a real time estimation and prediction of the various states of the threshing system (24).