SYSTEM FOR ANALYZING SEQUENCING DATA OF BACTERIAL STRAINS AND METHOD THEREOF

A system for analyzing sequencing data of bacterial strains and a method thereof are provided. The method for analyzing sequencing data of bacterial strains includes the following steps: searching a specific variable region of a first genetic sample sequence and searching another specific variable r...

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Hauptverfasser: LAI LIANGUAN, SYU JOEY JEN-HUI, CHENG CHIA-YANG, TSAI MONG-HSUN, CHUANG ERIC-Y, LIU WEI-I, LU TZU-PIN
Format: Patent
Sprache:chi ; eng
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Zusammenfassung:A system for analyzing sequencing data of bacterial strains and a method thereof are provided. The method for analyzing sequencing data of bacterial strains includes the following steps: searching a specific variable region of a first genetic sample sequence and searching another specific variable region of a second genetic sample sequence; determining whether both the specific variable region and the another specific variable region have an identical cross-sample subsequence; if both the specific variable region and the another specific variable region have the identical cross-sample subsequence, storing the cross-sample subsequence into a recording table; and if the identical cross-sample subsequence exists, comparing the cross-sample subsequence with a plurality of gene sequences of known strains stored in a database module to analyze a plurality of strains corresponding to the cross-sample subsequence in the first genetic sample sequence and the second genetic sample sequence. Thus, operand of the system