Draft genome sequence of Bacillus velezensis 2A-2B strain: a rhizospheric inhabitant of Sporobolus airoides (Torr.) Torr . , with antifungal activity against root rot causing phytopathogens

Draft genome sequence of Bacillus velezensis 2A-2B strain: a rhizospheric inhabitant of Sporobolus airoides (Torr.) Torr . , with antifungal activity against root rot causing phytopathogens

A strain from the rhizosphere of (Torr.) Torr , a grass in central-north México, was isolated during a biocontrol of phytopathogens scrutiny study. The 2A-2B strain exhibited at least 60% of growth inhibition of virulent isolates of phytopathogens causing root rot. These phytopathogens include , , a...

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Veröffentlicht in:Standards in genomic sciences 2017-12, Vol.12 (1), p.73-10, Article 73
Hauptverfasser: Martínez-Raudales, Inés, De La Cruz-Rodríguez, Yumiko, Alvarado-Gutiérrez, Alejandro, Vega-Arreguín, Julio, Fraire-Mayorga, Ahuitz, Alvarado-Rodríguez, Miguel, Balderas-Hernández, Victor, Fraire-Velázquez, Saúl
Format: Artikel
Sprache:eng
Schlagworte:
Analysis
Antifungal agents
Bacterial biocontrol agent
Bacterial genetics
Biological control
Capsicum annuum L
Chile wilt biocontrol
DNA sequencing
Extended Genome Report
Fungal inhibition
Genes
Genomes
Genomics
Nucleotide sequencing
Pests
Phytophthora capsici
RNA
Root rot biocontrol
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Zusammenfassung:A strain from the rhizosphere of (Torr.) Torr , a grass in central-north México, was isolated during a biocontrol of phytopathogens scrutiny study. The 2A-2B strain exhibited at least 60% of growth inhibition of virulent isolates of phytopathogens causing root rot. These phytopathogens include , , and . Furthermore, the 2A-2B strain is an indolacetic acid producer, and a plant inducer of PR1, which is an induced systemic resistance related gene in chili pepper plantlets. Whole genome sequencing was performed to generate a draft genome assembly of 3.953 MB with 46.36% of GC content, and a N50 of 294,737. The genome contains 3713 protein coding genes and 89 RNA genes. Moreover, comparative genome analysis revealed that the 2A-2B strain had the greatest identity (98.4%) with
ISSN:1944-3277
1944-3277
DOI:10.1186/s40793-017-0289-4