Genome-wide identification and characterization of eukaryotic protein kinases

The tropical liver fluke,   is a food-borne parasite responsible for the hepatobiliary disease fascioliasis. The recent completion of   genome sequencing by our group has provided a platform for the systematic analysis of the parasite genome. Eukaryotic protein kinases (ePKs) are regulators of cellu...

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Veröffentlicht in:Frontiers in bioscience 2020-06, Vol.25 (9), p.1787-1827, Article 4878
Hauptverfasser: Das, Kanhu Charan, Kalita, Parismita, Tripathi, Timir
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Sprache:eng
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Zusammenfassung:The tropical liver fluke,   is a food-borne parasite responsible for the hepatobiliary disease fascioliasis. The recent completion of   genome sequencing by our group has provided a platform for the systematic analysis of the parasite genome. Eukaryotic protein kinases (ePKs) are regulators of cellular phosphorylation. In the present study, we used various computational and bioinformatics tools to extensively analyse the ePKs in  FgePKs) genome. A total of 455 ePKs were identified that represent ~2% of the parasite genome. Out of these, 214 ePKs are typical kinases (Ser/Thr- and Tyr-specific ePKs), and 241 were other kinases. Several FgePKs were found to possess unusual domain architectures, which suggests the diverse nature of the proteins that can be exploited for designing novel inhibitors. 115 kinases showed
ISSN:1093-9946
2768-6701
2768-6698
1093-4715
DOI:10.2741/4878