Chromosome-level genome assembly of Guide Black-Fur sheep (Ovis aries)

Guide Black-Fur sheep (GD) is a breed of Tibetan sheep ( Ovis aries ) that lives in the Qinghai–Tibetan plateau region at an altitude of over 4,000 m. However, a lack of genomic information has made it difficult to understand the high-altitude adaptation of these sheep. We sequenced and assembled th...

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Veröffentlicht in:Scientific data 2024-06, Vol.11 (1), p.711-7, Article 711
Hauptverfasser: Lu, Zengkui, Yuan, Chao, An, Xuejiao, Chen, Zhixiang, Guo, Tingting, Liu, Jianbin
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Sprache:eng
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Zusammenfassung:Guide Black-Fur sheep (GD) is a breed of Tibetan sheep ( Ovis aries ) that lives in the Qinghai–Tibetan plateau region at an altitude of over 4,000 m. However, a lack of genomic information has made it difficult to understand the high-altitude adaptation of these sheep. We sequenced and assembled the GD reference genome using PacBio, Hi-C, and Illumina sequencing technologies. The final assembled genome size was 2.73 Gb, with a contig N50 of 20.30 Mb and a scaffold N50 of 107.63 Mb. The genome is predicted to contain 20,759 protein-coding genes, of which 98.42 have functional annotations. Repeat elements account for approximately 52.2% of the genomic landscape. The completeness of the GD genome assembly is highlighted by a BUSCO score of 93.1%. This high-quality genome assembly provides a critical resource for future molecular breeding and genetic improvement of Tibetan sheep.
ISSN:2052-4463
2052-4463
DOI:10.1038/s41597-024-03564-x