Epigenetic age-predictor for mice based on three CpG sites

Epigenetic clocks for mice were generated based on deep-sequencing analysis of the methylome. Here, we demonstrate that site-specific analysis of DNA methylation levels by pyrosequencing at only three CG dinucleotides (CpGs) in the genes , , and facilitates precise estimation of chronological age in...

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Veröffentlicht in:eLife 2018-08, Vol.7
Hauptverfasser: Han, Yang, Eipel, Monika, Franzen, Julia, Sakk, Vadim, Dethmers-Ausema, Bertien, Yndriago, Laura, Izeta, Ander, de Haan, Gerald, Geiger, Hartmut, Wagner, Wolfgang
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Sprache:eng
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Zusammenfassung:Epigenetic clocks for mice were generated based on deep-sequencing analysis of the methylome. Here, we demonstrate that site-specific analysis of DNA methylation levels by pyrosequencing at only three CG dinucleotides (CpGs) in the genes , , and facilitates precise estimation of chronological age in murine blood samples, too. DBA/2 mice revealed accelerated epigenetic aging as compared to C57BL6 mice, which is in line with their shorter life-expectancy. The three-CpG-predictor provides a simple and cost-effective biomarker to determine biological age in large intervention studies with mice.
ISSN:2050-084X
2050-084X
DOI:10.7554/eLife.37462