Hybrid modelling for stroke care: Review and suggestions of new approaches for risk assessment and simulation of scenarios

•Modelling is needed to deal with the complexity of stroke.•There exist 3 relevant modelling approaches with complementary strengths and weaknesses: machine learning, large-scale network, and mechanistic models.•Hybrid modelling can make use of their respective strengths.•We review these approaches...

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Veröffentlicht in:NeuroImage clinical 2021-01, Vol.31, p.102694, Article 102694
Hauptverfasser: Herrgårdh, Tilda, Madai, Vince I., Kelleher, John D., Magnusson, Rasmus, Gustafsson, Mika, Milani, Lili, Gennemark, Peter, Cedersund, Gunnar
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Sprache:eng
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Zusammenfassung:•Modelling is needed to deal with the complexity of stroke.•There exist 3 relevant modelling approaches with complementary strengths and weaknesses: machine learning, large-scale network, and mechanistic models.•Hybrid modelling can make use of their respective strengths.•We review these approaches and propose a new hybrid scheme for calculation of stroke risk calculation and simulation of care scenarios. Stroke is an example of a complex and multi-factorial disease involving multiple organs, timescales, and disease mechanisms. To deal with this complexity, and to realize Precision Medicine of stroke, mathematical models are needed. Such approaches include: 1) machine learning, 2) bioinformatic network models, and 3) mechanistic models. Since these three approaches have complementary strengths and weaknesses, a hybrid modelling approach combining them would be the most beneficial. However, no concrete approach ready to be implemented for a specific disease has been presented to date. In this paper, we both review the strengths and weaknesses of the three approaches, and propose a roadmap for hybrid modelling in the case of stroke care. We focus on two main tasks needed for the clinical setting: a) For stroke risk calculation, we propose a new two-step approach, where non-linear mixed effects models and bioinformatic network models yield biomarkers which are used as input to a machine learning model and b) For simulation of care scenarios, we propose a new four-step approach, which revolves around iterations between simulations of the mechanistic models and imputations of non-modelled or non-measured variables. We illustrate and discuss the different approaches in the context of Precision Medicine for stroke.
ISSN:2213-1582
2213-1582
DOI:10.1016/j.nicl.2021.102694