Date Palm Waste Compost Application Increases Soil Microbial Community Diversity in a Cropping Barley ( Hordeum vulgare L.) Field

Application of date palm waste compost is quite beneficial in improving soil properties and crop growth. However, the effect of its application on soil microbial communities is less understood. High-throughput sequencing and quantitative real-time PCR (qPCR) were used to evaluate the effect of compo...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Biology (Basel, Switzerland) Switzerland), 2023-04, Vol.12 (4), p.546
Hauptverfasser: Ghouili, Emna, Abid, Ghassen, Hogue, Richard, Jeanne, Thomas, D'Astous-Pagé, Joël, Sassi, Khaled, Hidri, Yassine, M'Hamed, Hatem Cheikh, Somenahally, Anil, Xue, Qingwu, Jebara, Moez, Nefissi Ouertani, Rim, Riahi, Jouhaina, de Oliveira, Ana Caroline, Muhovski, Yordan
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
Beschreibung
Zusammenfassung:Application of date palm waste compost is quite beneficial in improving soil properties and crop growth. However, the effect of its application on soil microbial communities is less understood. High-throughput sequencing and quantitative real-time PCR (qPCR) were used to evaluate the effect of compost application on the soil microbial composition in a barley field during the tillering, booting and ripening stages. The results showed that compost treatment had the highest bacterial and fungal abundance, and its application significantly altered the richness (Chao1 index) and α-diversity (Shannon index) of fungal and bacterial communities. The dominant bacterial phyla found in the samples were and while the dominant fungal orders were and . Interestingly, compost enriched the relative abundance of beneficial microorganisms such as , , and and reduced those of harmful microorganisms such as , and . Functional prediction based on Phylogenetic Investigation of Communities by Reconstruction of Unobserved States (PICRUSt) showed that amplicon sequence variant (ASV) sequences related to energy metabolism, amino acid metabolism and carbohydrate metabolism were associated with compost-treated soil. Based on Fungi Functional Guild (FUNGuild), identified fungi community metabolic functions such as wood saprotroph, pathotroph, symbiotroph and endophyte were associated with compost-treated soil. Overall, compost addition could be considered as a sustainable practice for establishing a healthy soil microbiome and subsequently improving the soil quality and barley crop production.
ISSN:2079-7737
2079-7737
DOI:10.3390/biology12040546