Prognostic value of a five-lncRNA signature in esophageal squamous cell carcinoma

The aim of this study was to identify prognostic long non-coding RNAs (lncRNAs) and develop a multi-lncRNA signature for suvival prediction in esophageal squamous cell carcinoma (ESCC). The clinical and gene expression data from Gene Expression Omnibus database (GSE53624, n = 119) were obtianed as t...

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Veröffentlicht in:Cancer Cell International 2020-08, Vol.20 (1), p.386-386, Article 386
Hauptverfasser: Zhang, Lan, Li, Pan, Liu, Enjie, Xing, Chenju, Zhu, Di, Zhang, Jianying, Wang, Weiwei, Jiang, Guozhong
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Sprache:eng
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Zusammenfassung:The aim of this study was to identify prognostic long non-coding RNAs (lncRNAs) and develop a multi-lncRNA signature for suvival prediction in esophageal squamous cell carcinoma (ESCC). The clinical and gene expression data from Gene Expression Omnibus database (GSE53624, n = 119) were obtianed as training set. A total of 98 paired ESCC tumor and normal tissues were detected by RNA sequencing and used as test set. Another 84 ESCC tissues were used for real-time quantitative PCR(qRT-PCR) and as an independent validation cohort. Survival analysis, Cox regression and Kaplan-Meier analysis were performed. We screened a prognostic marker of ESCC from the GSE53624 dataset and named it as the five-lncRNA signature including AC007179.1, MORF4L2-AS1, RP11-488I20.9, RP13-30A9.2, RP4-735C1.6, which could classify patients into high- and low-risk groups with significantly different survival(median survival: 1.75 years vs. 4.01 years, log rank  
ISSN:1475-2867
1475-2867
DOI:10.1186/s12935-020-01480-9