Rapid and Ultrasensitive Detection of H. aduncum via the RPA-CRISPR/Cas12a Platform

is one of six pathogens responsible for human anisakiasis. Infection with can cause acute abdominal symptoms and allergic reactions and is prone to misdiagnosis in clinical practice. This study aims to enhance the efficiency and accuracy of detecting in food ingredients. We targeted the internal tra...

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Veröffentlicht in:Molecules (Basel, Switzerland) Switzerland), 2024-10, Vol.29 (20), p.4789
Hauptverfasser: Wang, Xiaoming, Chen, Xiang, Xu, Ting, Jin, Xingsheng, Jiang, Junfang, Guan, Feng
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Sprache:eng
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Zusammenfassung:is one of six pathogens responsible for human anisakiasis. Infection with can cause acute abdominal symptoms and allergic reactions and is prone to misdiagnosis in clinical practice. This study aims to enhance the efficiency and accuracy of detecting in food ingredients. We targeted the internal transcribed spacer 1 (ITS 1) regions of to develop a visual screening method for detecting using recombinase polymerase amplification (RPA) combined with the CRISPR/Cas12a system. By comparing the ITS 1 region sequences of eight nematode species, we designed specific primers and CRISPR RNA (crRNA). The specificity of RPA primers was screened and evaluated, and the CRISPR system was optimized. We assessed its specificity and sensitivity and performed testing on commercial samples. The results indicated that the alternative primer ADU 1 was the most effective. The final optimized concentrations were 250 nM for Cas12a, 500 nM for crRNA, and 500 nM for ssDNA. The complete test procedure was achievable within 45 min at 37 °C, with a limit of detection (LOD) of 1.27 pg/μL. The amplified product could be directly observed using a fluorescence microscope or ultraviolet lamp. Detection results for 15 samples were entirely consistent with those obtained via Sanger sequencing, demonstrating the higher efficacy of this method for detecting and identifying . This visual detection method, characterized by simple operation, visual results, high sensitivity, and specificity, meets the requirements for food safety testing and enhances monitoring efficiency.
ISSN:1420-3049
1420-3049
DOI:10.3390/molecules29204789