Identification of Dian Ji Xue Teng (Kadsura interior) with DNA barcodes
Objective: To identify Kadsura interior (Dian Ji Xue Teng, Schisandraceae) by using DNA barcoding. Methods: We analyzed five DNA barcodes (ITS, ITS2, psbA-trnH, matK and rbcL) using DNA barcoding in terms of distance-based, tree-based and character-based identification to distinguish Kadsura interio...
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Veröffentlicht in: | World Journal of Traditional Chinese Medicine 2017-01, Vol.3 (1), p.11-15 |
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Sprache: | eng |
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Zusammenfassung: | Objective: To identify Kadsura interior (Dian Ji Xue Teng, Schisandraceae) by using DNA barcoding. Methods: We analyzed five DNA barcodes (ITS, ITS2, psbA-trnH, matK and rbcL) using DNA barcoding in terms of distance-based, tree-based and character-based identification to distinguish Kadsura interior and its adulterants. Results: In distance-based and tree-based identification, K. interior could be distinguished easily from the species of Schisandra and K. coccinea. In character-based identification, there are two single nucleotide polymorphisms (SNPs) in ITS and one SNP in psbA-trnH which can be used to distinguish K. interior from K. heteroclita and K. longipedunculata. Conclusion: The results indicate that DNA barcoding can be used to identify K. interior. ITS and psbA-trnH sequence can be the most ideal DNA barcode for discriminating K. interior and its adulterants by the combination analysis of distance-based, tree-based and character-based identification (SNPs). |
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ISSN: | 2311-8571 2311-8571 |
DOI: | 10.15806/j.issn.2311-8571.2016.0017 |