Chromatin structure profile data from DNS-seq: Differential nuclease sensitivity mapping of four reference tissues of B73 maize (Zea mays L)

Presented here are data from Next-Generation Sequencing of differential micrococcal nuclease digestions of formaldehyde-crosslinked chromatin in selected tissues of maize (Zea mays) inbred line B73. Supplemental materials include a wet-bench protocol for making DNS-seq libraries, the DNS-seq data pr...

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Veröffentlicht in:Data in brief 2018-10, Vol.20, p.358-363
Hauptverfasser: Turpin, Zachary M., Vera, Daniel L., Savadel, Savannah D., Lung, Pei-Yau, Wear, Emily E., Mickelson-Young, Leigh, Thompson, William F., Hanley-Bowdoin, Linda, Dennis, Jonathan H., Zhang, Jinfeng, Bass, Hank W.
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Sprache:eng
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Zusammenfassung:Presented here are data from Next-Generation Sequencing of differential micrococcal nuclease digestions of formaldehyde-crosslinked chromatin in selected tissues of maize (Zea mays) inbred line B73. Supplemental materials include a wet-bench protocol for making DNS-seq libraries, the DNS-seq data processing pipeline for producing genome browser tracks. This report also includes the peak-calling pipeline using the iSeg algorithm to segment positive and negative peaks from the DNS-seq difference profiles. The data repository for the sequence data is the NCBI SRA, BioProject Accession PRJNA445708.
ISSN:2352-3409
2352-3409
DOI:10.1016/j.dib.2018.08.015