Determination of internal controls for quantitative gene expression of Spodoptera litura under microbial pesticide stress
Quantitative real-time polymerase chain reaction (qRT-PCR) has become a commonly used method for the quantification of gene expression. However, accurate qRT-PCR analysis requires a valid internal reference for data normalization. To determine the valid reference characterized with low expression va...
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Veröffentlicht in: | Scientific reports 2024-03, Vol.14 (1), p.6143-6143, Article 6143 |
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Sprache: | eng |
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Zusammenfassung: | Quantitative real-time polymerase chain reaction (qRT-PCR) has become a commonly used method for the quantification of gene expression. However, accurate qRT-PCR analysis requires a valid internal reference for data normalization. To determine the valid reference characterized with low expression variability among
Spodoptera litura
samples after microbial pesticide treatments, nine housekeeping genes, glyceraldehyde-3-phosphate dehydrogenase (
GAPDH
), arginine kinase, ubiquitin C, actin-5C (
ACT5C
), actin, ribosomal protein S13 (
RPS13
), tubulin, acidic ribosomal protein P0 (
RPLP0
) and ubiquinol-cytochrome c reductase, were evaluated for their suitability using geNorm, Normfinder, BestKeeper, RefFinder and the comparative delta CT methods in this study.
S. litura
larvae after direct treatment (larvae were immersed in biopesticides), indirect treatment (larvae were fed with biopesticide immersed artificial diets) and comprehensive treatment (larvae were treated with the first two treatments in sequence), respectively with
Metarhizium anisopliae
,
Empedobacter brevis
and
Bacillus thuringiensis
, were investigated. The results indicated that the best sets of internal references were as follows:
RPLP0
and
ACT5C
for direct treatment conditions;
RPLP0
and
RPS13
for indirect treatment conditions;
RPS13
and
GAPDH
for comprehensive treatment conditions;
RPS13
and
RPLP0
for all the samples. These results provide valuable bases for further genetic researches in
S. litura
. |
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ISSN: | 2045-2322 2045-2322 |
DOI: | 10.1038/s41598-024-56724-9 |