Chryseobacterium schmidteae sp. nov. a novel bacterial species isolated from planarian Schmidtea mediterranea

Marseille-P9602 T is a Chryseobacterium -like strain that we isolated from planarian Schmidtea mediterranea and characterized by taxono-genomic approach. We found that Marseille-P9602 T strain exhibits a 16S rRNA gene sequence similarity of 98.76% with Chryseobacterium scophthalmum LMG 13028 T strai...

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Veröffentlicht in:Scientific reports 2021-05, Vol.11 (1), p.11002-14, Article 11002
Hauptverfasser: Kangale, Luis Johnson, Raoult, Didier, Ghigo, Eric, Fournier, Pierre-Edouard
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Sprache:eng
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Zusammenfassung:Marseille-P9602 T is a Chryseobacterium -like strain that we isolated from planarian Schmidtea mediterranea and characterized by taxono-genomic approach. We found that Marseille-P9602 T strain exhibits a 16S rRNA gene sequence similarity of 98.76% with Chryseobacterium scophthalmum LMG 13028 T strain, the closest phylogenetic neighbor. Marseille-P9602 T strain was observed to be a yellowish-pigmented, Gram-negative, rod-shaped bacterium, growing in aerobic conditions and belonging to the Flavobacteriaceae family. The major fatty acids detected are 13-methyl-tetradecanoic acid (57%), 15-methylhexadecenoic acid (18%) and 12-methyl-tetradecanoic acid (8%). Marseille-P9602 strain size was found from genome assembly to be of 4,271,905 bp, with a 35.5% G + C content. The highest values obtained for Ortho-ANI and dDDH were 91.67% and 44.60%, respectively. Thus, hereby we unravel that Marseille-P9602 strain is sufficiently different from other closed related species and can be classified as a novel bacterial species, for which we propose the name of Chryseobacterium schmidteae sp. nov. Type strain is Marseille-P9602 T (= CSUR P9602 T  = CECT 30295 T ).
ISSN:2045-2322
2045-2322
DOI:10.1038/s41598-021-90562-3