Comprehensive Draft Genome Analyses of Three Rockfishes (Scorpaeniformes, Sebastiscus ) via Genome Survey Sequencing
species, marine rockfishes, are of essential economic value. However, the genomic data of this genus is lacking and incomplete. Here, whole genome sequencing of all species of was conducted to provide fundamental genomic information. The genome sizes were estimated to be 802.49 Mb ( ), 786.79 Mb ( )...
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Veröffentlicht in: | Current issues in molecular biology 2021-11, Vol.43 (3), p.2048-2058 |
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Hauptverfasser: | , , , |
Format: | Artikel |
Sprache: | eng |
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Zusammenfassung: | species, marine rockfishes, are of essential economic value. However, the genomic data of this genus is lacking and incomplete. Here, whole genome sequencing of all species of
was conducted to provide fundamental genomic information. The genome sizes were estimated to be 802.49 Mb (
), 786.79 Mb (
), and 776.00 Mb (
) by using k-mer analyses. The draft genome sequences were initially assembled, and genome-wide microsatellite motifs were identified. The heterozygosity, repeat ratios, and numbers of microsatellite motifs all suggested possibly that
is more closely related to
than
at the genetic level. Moreover, the complete mitochondrial genome sequences were assembled from the whole genome data and the phylogenetic analyses genetically supported the validation of
species. This study provides an important genome resource for further studies of
species. |
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ISSN: | 1467-3045 1467-3037 1467-3045 |
DOI: | 10.3390/cimb43030141 |