Comprehensive Draft Genome Analyses of Three Rockfishes (Scorpaeniformes, Sebastiscus ) via Genome Survey Sequencing

species, marine rockfishes, are of essential economic value. However, the genomic data of this genus is lacking and incomplete. Here, whole genome sequencing of all species of was conducted to provide fundamental genomic information. The genome sizes were estimated to be 802.49 Mb ( ), 786.79 Mb ( )...

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Veröffentlicht in:Current issues in molecular biology 2021-11, Vol.43 (3), p.2048-2058
Hauptverfasser: Jia, Chenghao, Yang, Tianyan, Yanagimoto, Takashi, Gao, Tianxiang
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Sprache:eng
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Zusammenfassung:species, marine rockfishes, are of essential economic value. However, the genomic data of this genus is lacking and incomplete. Here, whole genome sequencing of all species of was conducted to provide fundamental genomic information. The genome sizes were estimated to be 802.49 Mb ( ), 786.79 Mb ( ), and 776.00 Mb ( ) by using k-mer analyses. The draft genome sequences were initially assembled, and genome-wide microsatellite motifs were identified. The heterozygosity, repeat ratios, and numbers of microsatellite motifs all suggested possibly that is more closely related to than at the genetic level. Moreover, the complete mitochondrial genome sequences were assembled from the whole genome data and the phylogenetic analyses genetically supported the validation of species. This study provides an important genome resource for further studies of species.
ISSN:1467-3045
1467-3037
1467-3045
DOI:10.3390/cimb43030141