Helminth communities of sigmonontine rodents in cocoa agroforestry systems in Brazil

Agroforestry is an alternative kind of land use where the native vegetation is surrounded or intercalated by crops of economic interest. This system may maintain species richness by promoting the habitat heterogeneity or serving as ecological corridors. The aim of this study was to describe the gastrointestinal helminth fauna and to analyse the parasitological parameters of the helminth communities of six sigmodontine rodents in a cocoa agroforestry system in the municipality of Ilhéus, state of Bahia, Northeast Brazil. This is a novel study of helminth fauna in this kind of agroforestry. Rodents were captured in live-traps and euthanised for helminth recovery. Specimens were counted and identified to the species level whenever possible. Helminth abundance, intensity, and prevalence were calculated for each species and each host. The total abundance and prevalence of helminths were compared among localities and three attributes of the host: species, gender and age using generalised linear models. Considering all rodents, 52.14% of them were parasitised with at least one helminth species. Eight nematode species were identified and another seven morphospecies were identified to the genus level. The most abundant species were Hassalstrongylus epsilon, Stilestrongylus eta, Guerrerostrongylus zetta, and Syphacia alata. The opportunistic host species Oligoryzomys nigripes and Akodon cursor, besides the water rat Nectomys squamipes, were the most infected species for helminth parasites. Hylaeamys seuanezi was also an important host with the highest helminth species richness. This is the first report of the helminth fauna for this host. The locality most distant from the native vegetation and closest to the city had the highest helminth prevalence and mean species richness. The species richness in the helminth communities of Euryoryzomys russatus, N. squamipes and O. nigripes in these Cabruca agroforestries were within the range found in studies carried out in Atlantic Forest areas. [Display omitted] •For most of the host species, helminth species richness was similar to preserved areas of Atlantic Forest.•The opportunistic host species were the most susceptible to the helminth parasitism.•Helminth abundance was influenced by host species.•Helminth prevalence was influenced by host species, host gender, and locality.•Most of the helminth species were host-species-specific.