Transcriptome-wide identification of WRKY transcription factors and their expression profiles under different stress in Cynanchum thesioides
is an important economic and medicinal plant widely distributed in northern China. WRKY transcription factors (TFs) play important roles in plant growth, development and regulating responses. However, there is no report on the genes in . A total of 19 WRKY transcriptome sequences with complete ORFs...
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Veröffentlicht in: | PeerJ (San Francisco, CA) CA), 2022-12, Vol.10, p.e14436-e14436, Article e14436 |
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Sprache: | eng |
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Zusammenfassung: | is an important economic and medicinal plant widely distributed in northern China. WRKY transcription factors (TFs) play important roles in plant growth, development and regulating responses. However, there is no report on the
genes in
. A total of 19 WRKY transcriptome sequences with complete ORFs were identified as WRKY transcriptome sequences by searching for WRKYs in RNA sequencing data. Then, the
genes were classified by phylogenetic and conserved motif analysis of the WRKY family in
and
. qRT-PCR was used to determine the expression patterns of 19
genes in different tissues and seedlings of
under plant hormone (ABA and ETH) and abiotic stresses (cold and salt). The results showed that 19
genes could be divided into groups I-III according to their structure and phylogenetic characteristics, and group II could be divided into five subgroups. The prediction of
gene protein interactions indicates that
is involved in many biological processes. In addition, the
gene was differentially expressed in different tissues and positively responded to abiotic stress and phytohormone treatment, among which
,
and
were significantly induced under various stresses. This study is the first to identify the
gene family in
, and the systematic analysis lays a foundation for further identification of the function of
genes in
. |
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ISSN: | 2167-8359 2167-8359 |
DOI: | 10.7717/peerj.14436 |