Transcriptomic and bioinformatic analysis of Histone H2A-genes in Lates calcarifer and Oreochromis niloticus upon Vibrio vulnificus challenge

•Expression profiling of histone H2A-derived AMP genes, GIFT-Histone, and Lc-Histone upon in vivo bacterial challenge has been investigated.•Immune responses against Gram-negative bacteria in Oreochromis niloticus and Lates calcarifer has been explored.•Species-specific variations in expression patterns were noted in the study. Histone H2A-derived antimicrobial peptides (AMPs) have been recognized for their antimicrobial properties and role in host defense mechanisms. The present study investigated the transcriptional responses of two histone H2A-derived AMPs, Lc-Histone from Lates calcarifer and GIFT-Histone from Oreochromis niloticus, in response to Vibrio vulnificus infection. The genes encoding these peptides were amplified and sequenced from fingerling stage fishes, followed by in silico analysis and phylogenetic characterization using ClustalW. Computational methods were used to assess their functional attributes, and in vivo bacterial challenge assay was employed to evaluate the efficacy. Sequence alignment identified conserved histone motifs, supporting their evolutionary conservation. The antimicrobial peptide database predicted membrane interaction potential, suggesting antimicrobial activity, alongside biofilm-active properties and efficient expression in heterologous protein systems. Expression profiling of Histone H2A-derived AMP genes under Gram-negative bacterial stimulation revealed distinct temporal dynamics, indicative of their innate immune response involvement. Significant gene expression variations were observed between L. calcarifer and O. niloticus. These baseline findings enhance understanding of host defense mechanisms and bacterial interactions in aquaculture. The antimicrobial potential of histone H2A-derived AMPs highlights their significance as therapeutic agents and warrants further investigation into their mechanisms of action and optimal usage in aquaculture settings.