High expression of PCOLCE gene indicate poor prognosis in patients and are associated with immune infiltration in glioma
The procollagen C-protease enhancer ( PCOLCE ) has been identified to influence tumor growth and metastasis in multiple cancers. However, the relationship between PCOLCE activity and the progression of gliomas remains largely unknown. Glioma RNA-seq data were derived from the Chinese Glioma Genome A...
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Veröffentlicht in: | Scientific reports 2023-03, Vol.13 (1), p.3820-3820, Article 3820 |
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Zusammenfassung: | The procollagen C-protease enhancer (
PCOLCE
) has been identified to influence tumor growth and metastasis in multiple cancers. However, the relationship between
PCOLCE
activity and the progression of gliomas remains largely unknown. Glioma RNA-seq data were derived from the Chinese Glioma Genome Atlas (CGGA) and The Cancer Genome Atlas databases for analysis. Kaplan–Meier survival curve, clinical characterization correlation, univariate and multivariate Cox, and receiver operating characteristic curve analyses were performed to assess the prognostic role of
PCOLCE
. Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, and Gene Set Enrichment Analysis were used to determine the functions or pathways associated with
PCOLCE
. The ESTIMATE and CIBERSORT algorithms, Spearman’s rank correlation analysis, and Tumor Immune Estimation Resource (TIMER) databases were used to explore the relationship between
PCOLCE
and immune infiltration. Correlation analysis between
PCOLCE
, related genes, and immune cell markers was conducted using the TIMER database. Immunophenoscore assays were performed to determine differential PCOLCE expression levels in glioma. The sensitivity of multi-drugs were determined to explore potential chemotherapeutic agents in between PCOLCE. Compared to normal brain tissue,
PCOLCE
expression was increased in glioma and correlated with shorter overall survival (OS). Furthermore, significant differences were observed in the immune scores and immune cell infiltration levels. PCOLCE is positively associated with immune checkpoints and many immune markers. Additionally, PCOLCE expression was higher in gliomas with higher IPS Z-scores in CGGA. High expression of PCOLCE increased sensitivity to multiple chemotherapy agents in CGGA (P |
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ISSN: | 2045-2322 2045-2322 |
DOI: | 10.1038/s41598-023-30413-5 |