Genome-Wide Identification and Expression Analysis under Abiotic Stress of BrAHL Genes in Brassica rapa
The AT-hook motif nuclear localized ( ) gene family is a highly conserved transcription factor critical for the growth, development, and stress tolerance of plants. However, the function of the gene family in ( ) remains unclear. In this study, 42 family members were identified from the genome and m...
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Veröffentlicht in: | International journal of molecular sciences 2023-08, Vol.24 (15), p.12447 |
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Sprache: | eng |
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Zusammenfassung: | The AT-hook motif nuclear localized (
) gene family is a highly conserved transcription factor critical for the growth, development, and stress tolerance of plants. However, the function of the
gene family in
(
) remains unclear. In this study, 42
family members were identified from the
genome and mapped to nine
chromosomes. Two clades have formed in the evolution of the
gene family. The results showed that most products encoded by
family genes are located in the nucleus. Gene duplication was common and expanded the
gene family. According to the analysis of
-regulatory elements, the genes interact with stress responses (osmotic, cold, and heavy metal stress), major hormones (abscisic acid), and light responses. In addition, the expression profiles revealed that
genes are widely expressed in different tissues.
was upregulated at 4 h under drought stress, highly expressed under cadmium conditions, and downregulated in response to cold conditions.
and
were upregulated at the initial time point and peaked at 12 h under cold and cadmium stress, respectively. Notably, the interactions between
genes and proteins under drought, cold, and heavy metal stresses were observed when predicting the protein-protein interaction network. |
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ISSN: | 1422-0067 1661-6596 1422-0067 |
DOI: | 10.3390/ijms241512447 |