Genome sequence of Planktotalea frisia type strain (SH6-1 T ), a representative of the Roseobacter group isolated from the North Sea during a phytoplankton bloom
SH6-1 Hahnke et al. (Int J Syst Evol Microbiol 62:1619-24, 2012) is a planktonic marine bacterium isolated during a phytoplankton bloom from the southern North Sea. It belongs to the group within the alphaproteobacterial family . Here we describe the draft genome sequence and annotation of the type...
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Veröffentlicht in: | Standards in genomic sciences 2018-04, Vol.13 (1), p.7-9, Article 7 |
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Format: | Artikel |
Sprache: | eng |
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Zusammenfassung: | SH6-1
Hahnke et al. (Int J Syst Evol Microbiol 62:1619-24, 2012) is a planktonic marine bacterium isolated during a phytoplankton bloom from the southern North Sea. It belongs to the
group within the alphaproteobacterial family
. Here we describe the draft genome sequence and annotation of the type strain SH6-1
. The genome comprises 4,106,736 bp and contains 4128 protein-coding and 38 RNA genes. The draft genome sequence provides evidence for at least three extrachromosomal elements, encodes genes for DMSP utilization, quorum sensing, photoheterotrophy and a type IV secretion system. This indicates not only adaptation to a free-living lifestyle of
but points also to interactions with prokaryotic or eukaryotic organisms. |
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ISSN: | 1944-3277 1944-3277 |
DOI: | 10.1186/s40793-018-0311-5 |