Genome assembly of the ectoparasitoid wasp Theocolax elegans
The ectoparasitoid wasp Theocolax elegans is a cosmopolitan and generalist pteromalid parasitoid of several major storage insect pests, and can effectively suppress a host population in warehouses. However, little molecular information about this wasp is currently available. In this study, we assemb...
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Veröffentlicht in: | Scientific data 2023-03, Vol.10 (1), p.159-10, Article 159 |
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Zusammenfassung: | The ectoparasitoid wasp
Theocolax elegans
is a cosmopolitan and generalist pteromalid parasitoid of several major storage insect pests, and can effectively suppress a host population in warehouses. However, little molecular information about this wasp is currently available. In this study, we assembled the genome of
T. elegans
using PacBio long-read sequencing, Illumina sequencing, and Hi-C methods. The genome assembly is 662.73 Mb in length with contig and scaffold N50 values of 1.15 Mb and 88.8 Mb, respectively. The genome contains 56.4% repeat sequences and 23,212 protein-coding genes were annotated. Phylogenomic analyses revealed that
T. elegans
diverged from the lineage leading to subfamily Pteromalinae (
Nasonia vitripennis
and
Pteromalus puparum
) approximately 110.5 million years ago. We identified 130 significantly expanded gene families, 34 contracted families, 248 fast-evolving genes, and 365 positively selected genes in
T. elegans
. Additionally, 260 olfactory receptors and 285 venom proteins were identified. This genome assembly provides valuable genetic bases for future investigations on evolution, molecular biology and application of
T. elegans
. |
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ISSN: | 2052-4463 2052-4463 |
DOI: | 10.1038/s41597-023-02067-5 |