Genome-wide identification of the GATA transcription factor family and their expression patterns under temperature and salt stress in Aspergillus oryzae
GATA transcription factors (TFs) are involved in the regulation of growth processes and various environmental stresses. Although GATA TFs involved in abiotic stress in plants and some fungi have been analyzed, information regarding GATA TFs in Aspergillus oryzae is extremely poor. In this study, we...
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Veröffentlicht in: | AMB Express 2021-04, Vol.11 (1), p.56-56, Article 56 |
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Zusammenfassung: | GATA transcription factors (TFs) are involved in the regulation of growth processes and various environmental stresses. Although GATA TFs involved in abiotic stress in plants and some fungi have been analyzed, information regarding GATA TFs in
Aspergillus
oryzae
is extremely poor. In this study, we identified and functionally characterized seven GATA proteins from
A.
oryzae 3.042
genome, including a novel AoSnf5 GATA TF with 20-residue between the Cys-X
2
-Cys motifs which was found in
Aspergillus
GATA TFs for the first time. Phylogenetic analysis indicated that these seven
A
.
oryzae
GATA TFs could be classified into six subgroups. Analysis of conserved motifs demonstrated that
Aspergillus
GATA TFs with similar motif compositions clustered in one subgroup, suggesting that they might possess similar genetic functions, further confirming the accuracy of the phylogenetic relationship. Furthermore, the expression patterns of seven
A.
oryzae
GATA TFs under temperature and salt stresses indicated that
A. oryzae
GATA TFs were mainly responsive to high temperature and high salt stress. The protein–protein interaction network of
A.
oryzae
GATA TFs revealed certain potentially interacting proteins. The comprehensive analysis of
A. oryzae
GATA TFs will be beneficial for understanding their biological function and evolutionary features and provide an important starting point to further understand the role of GATA TFs in the regulation of distinct environmental conditions in
A.
oryzae
. |
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ISSN: | 2191-0855 2191-0855 |
DOI: | 10.1186/s13568-021-01212-w |