Genome and tissue-specific transcriptomes of the large-polyp coral, Fimbriaphyllia (Euphyllia) ancora: a recipe for a coral polyp

Coral polyps are composed of four tissues; however, their characteristics are largely unexplored. Here we report biological characteristics of tentacles ( Te ), mesenterial filaments ( Me ), body wall ( Bo) , and mouth with pharynx ( MP ), using comparative genomic, morpho-histological, and transcri...

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Veröffentlicht in:Communications biology 2024-07, Vol.7 (1), p.899-14, Article 899
Hauptverfasser: Shikina, Shinya, Yoshioka, Yuki, Chiu, Yi-Ling, Uchida, Taiga, Chen, Emma, Cheng, Yin-Chu, Lin, Tzu-Chieh, Chu, Yu-Ling, Kanda, Miyuki, Kawamitsu, Mayumi, Fujie, Manabu, Takeuchi, Takeshi, Zayasu, Yuna, Satoh, Noriyuki, Shinzato, Chuya
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Sprache:eng
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Zusammenfassung:Coral polyps are composed of four tissues; however, their characteristics are largely unexplored. Here we report biological characteristics of tentacles ( Te ), mesenterial filaments ( Me ), body wall ( Bo) , and mouth with pharynx ( MP ), using comparative genomic, morpho-histological, and transcriptomic analyses of the large-polyp coral, Fimbriaphyllia ancora . A draft F. ancora genome assembly of 434 Mbp was created. Morpho-histological and transcriptomic characterization of the four tissues showed that they have distinct differences in structure, primary cellular composition, and transcriptional profiles. Tissue-specific, highly expressed genes (HEGs) of Te are related to biological defense, predation, and coral-algal symbiosis. Me expresses multiple digestive enzymes, whereas Bo expresses innate immunity and biomineralization-related molecules. Many receptors for neuropeptides and neurotransmitters are expressed in MP . This dataset and new insights into tissue functions will facilitate a deeper understanding of symbiotic biology, immunology, biomineralization, digestive biology, and neurobiology in corals. A draft genome and tissue-specific transcriptome assemblies of the large-polyp coral, Fimbriaphyllia ancora were established. This dataset and new insights into tissue functions will facilitate a deeper understanding of coral biology.
ISSN:2399-3642
2399-3642
DOI:10.1038/s42003-024-06544-4