Isolation, screening, and molecular characterization of indigenous Trichoderma isolates from West Java, Indonesia and their plant growth-promoting capability on rice plants (Oryza sativa L.)

Trichoderma species are widely acknowledged as growth-promoting fungi that have been utilized to enhance the growth and yield of numerous crops. This research examined the capacity of 30 Trichoderma strains, isolated from two organic rice fields in West Java, Indonesia, to enhance the germination, growth, and physiological characteristics of rice plants (Oryza sativa L.). In general, Trichoderma strain TM10 demonstrated the greatest ability to increase seed germination (97.25 %), vigor index (3122.83), and germination speed (59.91 seeds/day). This strain also increased seedling root length and seedling height by 101.62 % and 112.20 %, respectively. Plants treated with TM10 exhibited a notable improvement in root length, plant height, fresh weight, and dry weight compared to control plants, demonstrating increases of 188.68 %, 69.90 %, 157.41 %, and 159.38 %, respectively. Furthermore, the total chlorophyll content and stomatal number in TM10-treated plants exhibited increments of 75.23 % and 75.53 %, respectively. Five selected isolates (TM7, TM10, SB2, SB8, and SB14) were evaluated for their potential to produce plant growth-promoting compounds, including phosphatase enzyme (ranging from 0.54 to 11.14 µg pNP g−1h−1), indole-3-acetic acid (IAA) (ranging from 28.96 to 63.91 µg/mL), ammonia (ranging from 1.96 to 5.79 µg/mL), and hydrogen cyanide (HCN) (ranging from 221.76 to 274.82 ppm). The best strain, namely TM10, was then molecularly identified as Trichoderma yunnanense. This investigation demonstrates that Trichoderma spp. isolated from organic rice fields could be used as a bioinoculant in sustainable rice production.