Complex versus simple models: ion-channel cardiac toxicity prediction
There is growing interest in applying detailed mathematical models of the heart for ion-channel related cardiac toxicity prediction. However, a debate as to whether such complex models are required exists. Here an assessment in the predictive performance between two established large-scale biophysic...
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Veröffentlicht in: | PeerJ (San Francisco, CA) CA), 2018-02, Vol.6, p.e4352-e4352, Article e4352 |
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Format: | Artikel |
Sprache: | eng |
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Zusammenfassung: | There is growing interest in applying detailed mathematical models of the heart for ion-channel related cardiac toxicity prediction. However, a debate as to whether such complex models are required exists. Here an assessment in the predictive performance between two established large-scale biophysical cardiac models and a simple linear model
was conducted. Three ion-channel data-sets were extracted from literature. Each compound was designated a cardiac risk category using two different classification schemes based on information within CredibleMeds. The predictive performance of each model within each data-set for each classification scheme was assessed via a leave-one-out cross validation. Overall the
model performed equally as well as the leading cardiac models in two of the data-sets and outperformed both cardiac models on the latest. These results highlight the importance of benchmarking complex versus simple models but also encourage the development of simple models. |
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ISSN: | 2167-8359 2167-8359 |
DOI: | 10.7717/peerj.4352 |