Proteome-wide Mendelian randomization identifies causal plasma proteins in lung cancer

Plasma proteins are promising biomarkers and potential drug targets in lung cancer. To evaluate the causal association between plasma proteins and lung cancer, we performed proteome-wide Mendelian randomization meta-analysis (PW-MR-meta) based on lung cancer genome-wide association studies (GWASs),...

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Veröffentlicht in:iScience 2024-02, Vol.27 (2), p.108985, Article 108985
Hauptverfasser: Li, Hongru, Du, Sha, Dai, Jinglan, Jiang, Yunke, Li, Zaiming, Fan, Qihan, Zhang, Yixin, You, Dongfang, Zhang, Ruyang, Zhao, Yang, Christiani, David C., Shen, Sipeng, Chen, Feng
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Sprache:eng
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Zusammenfassung:Plasma proteins are promising biomarkers and potential drug targets in lung cancer. To evaluate the causal association between plasma proteins and lung cancer, we performed proteome-wide Mendelian randomization meta-analysis (PW-MR-meta) based on lung cancer genome-wide association studies (GWASs), protein quantitative trait loci (pQTLs) of 4,719 plasma proteins in deCODE and 4,775 in Fenland. Further, causal-protein risk score (CPRS) was developed based on causal proteins and validated in the UK Biobank. 270 plasma proteins were identified using PW-MR meta-analysis, including 39 robust causal proteins (both FDR-q 
ISSN:2589-0042
2589-0042
DOI:10.1016/j.isci.2024.108985