A framework for identifying factors controlling cyanobacterium Microcystis flos‐aquae blooms by coupled CCM–ECCM Bayesian networks

Cyanobacterial blooms in freshwater sources are a global concern, and gaining insight into their causes is crucial for effective resource management and control. In this study, we present a novel computational framework for the causal analysis of cyanobacterial harmful algal blooms (cyanoHABs) in Lake Kinneret. Our framework integrates Convergent Cross Mapping (CCM) and Extended CCM (ECCM) causal networks with Bayesian Network (BN) models. The constructed CCM–ECCM causal networks and BN models unveil significant interactions among factors influencing cyanoHAB formation. These interactions have been validated by domain experts and supported by evidence from peer‐reviewed publications. Our findings suggest that Microcystis flos‐aquae levels are influenced not only by community structure but also by ammonium, phosphate, oxygen, and temperature levels in the weeks preceding bloom occurrences. We demonstrated a non‐parametric computational framework for causal analysis of a multivariate ecosystem. Our framework offers a more comprehensive understanding of the underlying mechanisms driving M. flos‐aquae blooms in Lake Kinneret. It captures complex interactions and provides an explainable prediction model. By considering causal relationships, temporal dynamics, and joint probabilities of environmental factors, the proposed framework enhances our understanding of cyanoHABs in Lake Kinneret. This study introduces a computational framework to analyze the causes of cyanobacterial harmful algal blooms (cyanoHABs) in Lake Kinneret. By integrating CCM and Extended CCM (ECCM) causal networks with Bayesian Network (BN) model, we uncovered significant interactions among various factors influencing cyanoHAB formation. The framework provides a more comprehensive understanding of the mechanisms driving cyanoHABs, capturing complex interactions and offering explainable prediction models by considering causal relationships, temporal dynamics, and joint probabilities of environmental factors.