Conservation of threatened San Joaquin antelope squirrels: distribution surveys, habitat suitability, and conservation recommendations

The San Joaquin antelope squirrel (Ammospermophilus nelsoni: SJAS) is listed as Threatened pursuant to the California Endangered Species Act due to profound habitat loss throughout its range in the San Joaquin Desert in California. Habitat loss is still occurring and critical needs for SJAS include identifying occupied sites, quantifying optimal habitat conditions, and conserving habitat. Our objectives were to (1) conduct surveys to identify sites where SJAS were present, (2) assess habitat attributes on all survey sites, (3) generate a GIS-based model of SJAS habitat suitability, (4) use the model to determine the quantity and quality of remaining habitat, and (5) use these results to develop conservation recommendations. SJAS were detected on 160 of the 326 sites we surveyed using automated camera stations. Sites with SJAS typically were in arid upland shrub scrub communities where desert saltbush (Atriplex polycarpa) or jointfir (Ephedra californica) were the dominant shrubs, although shrubs need not be present for SJAS to be present. Sites with SJAS usually had relatively sparse ground cover with >10% bare ground and Arabian grass (Schismus arabicus) was the dominant grass. SJAS were more likely to occur on sites where kangaroo rats (Dipodomys spp.) were present and burrow abundance was greater, but SJAS were less likely to be present on sites with California ground squirrels (Otospermophilus beecheyi). Based on our habitat suitability model, an estimated 5,931 km2 of high or moderately high quality habitat and 4,753 km2 of lower quality habitat remain. To conserve SJAS, we recommend (1) conducting additional SJAS surveys on sites not surveyed but with suitable habitat, (2) conserving unprotected lands with suitable habitat, (3) managing vegetation on occupied sites if necessary, (4) restoring disturbed lands to increase suitability for SJAS, and (5) conducting translocations of SJAS to unoccupied sites with suitable habitat.