Majority sensing in synthetic microbial consortia

As synthetic biocircuits become more complex, distributing computations within multi-strain microbial consortia becomes increasingly beneficial. However, designing distributed circuits that respond predictably to variation in consortium composition remains a challenge. Here we develop a two-strain g...

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Veröffentlicht in:Nature communications 2020-07, Vol.11 (1), p.3659-3659, Article 3659
Hauptverfasser: Alnahhas, Razan N., Sadeghpour, Mehdi, Chen, Ye, Frey, Alexis A., Ott, William, Josić, Krešimir, Bennett, Matthew R.
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Sprache:eng
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Zusammenfassung:As synthetic biocircuits become more complex, distributing computations within multi-strain microbial consortia becomes increasingly beneficial. However, designing distributed circuits that respond predictably to variation in consortium composition remains a challenge. Here we develop a two-strain gene circuit that senses and responds to which strain is in the majority. This involves a co-repressive system in which each strain produces a signaling molecule that signals the other strain to down-regulate production of its own, orthogonal signaling molecule. This co-repressive consortium links gene expression to ratio of the strains rather than population size. Further, we control the cross-over point for majority via external induction. We elucidate the mechanisms driving these dynamics by developing a mathematical model that captures consortia response as strain fractions and external induction are varied. These results show that simple gene circuits can be used within multicellular synthetic systems to sense and respond to the state of the population. Designing distributed circuits that respond predictably to variation in bacterial populations remains difficult. Here the authors develop a two-strain circuit that senses and responds to the majority strain.
ISSN:2041-1723
2041-1723
DOI:10.1038/s41467-020-17475-z